PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57534.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 292aa    MW: 32313.1 Da    PI: 8.3196
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.1e-193080155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  GAY57534.1 30 SKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAACLLRG 80
                79********.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGQQVQRQRP KGVSSAKIKA KSSTNPGNKS KFVGVRQRPS GKWVAEIKDT TKKIRMWLGT  60
FETAEEAARA YDEAACLLRG SNTRTNFATP VFTNSHISLK IRNLLNHKRS LKQSSPSTTT  120
STGSNTTAPI KPSTIVCDNN SSLGSSNSSN DSFLSNNSYD SFIYQGMKQD GLIFDDAYRP  180
DLSSCIGDFE ASSSTQFYHS WPFPAGLDPL PLAQGGIQLP NKHAVAAFFP EQFDIELSEF  240
EHMKVERQIS ASLYAMNGLN QHLENAFDPS HALWDLPTMS QSSLLFSQCY EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-32ERF family protein