PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 142aa MW: 14465.7 Da PI: 4.0043 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 37.9 | 4.5e-12 | 91 | 129 | 1 | 39 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmr 39 rW+ qe+laL+++r++m+ ++r++ k+plWe+vs+++ GAY57196.1 91 RWPSQETLALLKIRSDMDAAFRDATVKGPLWEDVSRYIT 129 8***********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MQQGGGGGGD GEGGGGGGGT QSQYGEMATT STATAAAAAA HIDMGQQPVE AASPISSRPP 60 ASASNLDELM RLSGGDDDEG DRGGGVSSGN RWPSQETLAL LKIRSDMDAA FRDATVKGPL 120 WEDVSRYITD YQSELLMLAQ LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-17 | Trihelix family protein |