PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57180.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 390aa    MW: 41649.9 Da    PI: 6.644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-192272256
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d      ++ r +lg+f+taeeAa+a++ a+++l+g+
  GAY57180.1 22 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEEAARAYDDAARALRGA 72
                689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MGAVGENNVR GRRKSSSRGH HRFVGVRQRP SGRWVAEIKD SLQKVRLWLG TFDTAEEAAR  60
AYDDAARALR GANARTNFEL PDQTQTHSQL SNSNNRFLAD IINNNNNIEP FSFDQVCGSG  120
NEADGLLGAL KAKLFDFDGS TNTVTAVVLP QPQTQPQPPN NSTSGVAYTA NTSTNNSSSI  180
VAVPPREEVG LLLVSGNNNS NNCSIINSSG WSAAVAAAGK VDHHLIVGHQ VVAAAGHAYN  240
VGLQCQWHHP NIPPAQTSST TNMVWSTTEP TAGYEVSWST QMNRALSPEN IPLVTSTSVA  300
TTTAASTWPV SSGLTSNSTT VDFSFSDHYQ SAKMSTVSVG MPVTQIHGST TEGVCSSDQQ  360
FLHFENKAWT ASAATPASWD PLIYMSSPLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein