PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57177.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 592aa MW: 66082.7 Da PI: 4.6074

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.1e-52	9	139	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 lp GfrF+Ptdeel+++yL+ k++g++ e+ evi+e+d++k+ePwdLp + +k+e+ ew+fF++rd+ky++g r+nrat++gyWkatgkd+++ s+ GAY57177.1 9 LPLGFRFRPTDEELINHYLRLKINGRDSEV-EVIPEIDVCKLEPWDLPglSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRka 106 699**********************999.99***********6447888999**********************************966 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +g+kktLvfy+grapkge+t+W+mheyr GAY57177.1 107 gTNACIGMKKTLVFYRGRAPKGERTNWIMHEYR 139 55566*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MAVISMESLP LGFRFRPTDE ELINHYLRLK INGRDSEVEV IPEIDVCKLE PWDLPGLSVI 60 KTEDPEWFFF CPRDRKYPNG LRSNRATEAG YWKATGKDRT IRSRKAGTNA CIGMKKTLVF 120 YRGRAPKGER TNWIMHEYRP TREDLLDSST KPSQAAFVLC RLFRKPEEKV DVLKYDEVEQ 180 TESPDTNKSS LDDTSSDLVQ ETAMSDYVTP NAVLPVESCG NSHITSDVED HSTEGTVLEE 240 YQVPGEILNQ FDMPSNAQID CKIFSPVQSQ IHPDIAAYMD SPFASDFGND HFGLNFKDGA 300 GELDVSLTEL FDEVFNYQDE FSCAESINQK ELDVKSEVQL PGQVYMPQTI SPRNFHAQDN 360 GTCSDTDTDM SQVQEIGKGT ICDYGDNSAV QVASSAVGSL YGNLNNYDLS PTLNNSVNYG 420 GDFAVGTGIK IRTRQPQQRP NSFNSVNQGT AQRRLRLQVT LSPPMVGGDK QKDLGHSVED 480 DEVQSGVTKI NEIAEQSHTY VRADGEDGES QALRGDKIKE IKEESSANLR LRVKHDGESG 540 NCKVEPSQFV EAPSIHCGQS LSLVYKLSIL LVIIFFITFT GMWKSAVRAL CF

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MAVISMESLP LGFRFRPTDE ELINHYLRLK INGRDSEVEV IPEIDVCKLE PWDLPGLSVI  60
KTEDPEWFFF CPRDRKYPNG LRSNRATEAG YWKATGKDRT IRSRKAGTNA CIGMKKTLVF  120
YRGRAPKGER TNWIMHEYRP TREDLLDSST KPSQAAFVLC RLFRKPEEKV DVLKYDEVEQ  180
TESPDTNKSS LDDTSSDLVQ ETAMSDYVTP NAVLPVESCG NSHITSDVED HSTEGTVLEE  240
YQVPGEILNQ FDMPSNAQID CKIFSPVQSQ IHPDIAAYMD SPFASDFGND HFGLNFKDGA  300
GELDVSLTEL FDEVFNYQDE FSCAESINQK ELDVKSEVQL PGQVYMPQTI SPRNFHAQDN  360
GTCSDTDTDM SQVQEIGKGT ICDYGDNSAV QVASSAVGSL YGNLNNYDLS PTLNNSVNYG  420
GDFAVGTGIK IRTRQPQQRP NSFNSVNQGT AQRRLRLQVT LSPPMVGGDK QKDLGHSVED  480
DEVQSGVTKI NEIAEQSHTY VRADGEDGES QALRGDKIKE IKEESSANLR LRVKHDGESG  540
NCKVEPSQFV EAPSIHCGQS LSLVYKLSIL LVIIFFITFT GMWKSAVRAL CF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-139	NAC family protein