PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57155.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 428aa MW: 48133.6 Da PI: 5.7948

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.9	6e-51	15	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + GAY57155.1 15 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIREVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS-G 111 69**************************.9***********964444222455**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + +gl+ktLvfykgrap+g+k+dW+mheyrle GAY57155.1 112 FRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLE 144 999**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLEDMNLSIN GQSQVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIREV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFRRIGLRKT 120 LVFYKGRAPH GQKSDWIMHE YRLEESNNQQ QDIMINIQPS NSSIMGESSE SIPEDGWVVC 180 RVFRKKNYQK TLESPRTITS TSVMDSNNKS HMLIGSSNDA VLNQLLLYMG SGSCKMEKVN 240 GGSSSNTTIM NSNDDDDDDM RITLTANINN NNSSITELLQ ERFMHLPRLE LDGPSIPINS 300 TSPFDQDRML KSCYQTVDDL ALTGTAEAAG IGCGASDTTK STGLNDWVAL DRLVASQLNG 360 QVIDSSKQQL SCFSDSNAVF NFCPGDHDHL HNSQRSNQVY NNDNDLWSSF TKSSSSPSSS 420 DPLCHLSV

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLEDMNLSIN GQSQVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIREV DLNKLEPWDI  60
QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFRRIGLRKT  120
LVFYKGRAPH GQKSDWIMHE YRLEESNNQQ QDIMINIQPS NSSIMGESSE SIPEDGWVVC  180
RVFRKKNYQK TLESPRTITS TSVMDSNNKS HMLIGSSNDA VLNQLLLYMG SGSCKMEKVN  240
GGSSSNTTIM NSNDDDDDDM RITLTANINN NNSSITELLQ ERFMHLPRLE LDGPSIPINS  300
TSPFDQDRML KSCYQTVDDL ALTGTAEAAG IGCGASDTTK STGLNDWVAL DRLVASQLNG  360
QVIDSSKQQL SCFSDSNAVF NFCPGDHDHL HNSQRSNQVY NNDNDLWSSF TKSSSSPSSS  420
DPLCHLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	5e-95	NAC family protein