PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 714aa MW: 78330 Da PI: 6.4074 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.4 | 1.4e-19 | 29 | 84 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t+ q+++Le++F+ +++p++++r +L+++lgL rq+k+WFqNrR+++k GAY57130.1 29 KKRYHRHTALQIQRLEAMFKDCPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 84 678899***********************************************998 PP | |||||||
2 | START | 174.6 | 6e-55 | 227 | 448 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 +a a++el+++ + +ep+W+kss ++++ d + + f+++++ ++e +r+sgvv+m+ lv ++d + +W e ++ a+t+evis GAY57130.1 227 IAANAMEELLRLLQTNEPLWMKSStdgrDILDLDSYERMFPRANShlknpnVRIESSRDSGVVIMNGLALVDMFMDCS-KWVELFPtivsMAKTIEVIS 324 67889***********************************999999****99**************************.******999999******** PP TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX. CS START 87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp. 177 sg g l lm+ elq+lsp+vp R+f+++Ry++q ++g+w++v vS ds+q+ ++ ++++pSg+li++++ng+skvtwveh + ++r+p GAY57130.1 325 SGmmgghsGSLLLMYEELQVLSPVVPtREFYVLRYCQQIEQGSWAVVNVSYDSPQFSSQ----CQSHRFPSGCLIQDLPNGYSKVTWVEHLEIEDRTPi 419 ********************************************************886....88999******************************* PP HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 178 hwllrslvksglaegaktwvatlqrqcek 206 h l++ l++sg+a+ga +w+atlqr ce+ GAY57130.1 420 HRLYQDLIQSGMAFGADRWLATLQRMCER 448 ***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 714 aa Download sequence |
MEFGSGGGGG GGGSGSGGDH DGSDPQKRKK RYHRHTALQI QRLEAMFKDC PHPDEKQRLQ 60 LSRELGLAPR QIKFWFQNRR TQMKAQHERA DNCGLRAEND KIRCENIAIR EALKNVICPS 120 CGGPPVTEDS YFDEQKLRME NAQLKEELDR VSSIAAKYIG RPISQLPPVQ PIHISSLDLT 180 MGTFGGQGIS GPSLDLDLLP GSSSTLPNLP YQQIVLSDMD KSLMTDIAAN AMEELLRLLQ 240 TNEPLWMKSS TDGRDILDLD SYERMFPRAN SHLKNPNVRI ESSRDSGVVI MNGLALVDMF 300 MDCSKWVELF PTIVSMAKTI EVISSGMMGG HSGSLLLMYE ELQVLSPVVP TREFYVLRYC 360 QQIEQGSWAV VNVSYDSPQF SSQCQSHRFP SGCLIQDLPN GYSKVTWVEH LEIEDRTPIH 420 RLYQDLIQSG MAFGADRWLA TLQRMCERFA CLMVSGTSTR DLGGVIPSPD GKRSMMKLAQ 480 RMVSSFCTSI STSNRHRGTT ISGLNEVGVR VTLHKSMDPG QPNGVVLNAA TTFWLPIPPQ 540 NVFNFFKDER TRPQWDVLTN GNAVQEVAHI ANGSNPGNCI SVLRAINTSQ NNMLILQESC 600 IDSSGSLVVY CPVDLPAINI AMSGEDPSYI PLLPSGFTIS PDGHLDQGDG ASTSSNVHGN 660 MGSRSSGSLI SVAFQILVSS LPSAKLNMES VTTVNNLIGT TVQQIKAALN CPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 0.0 | HD-ZIP family protein |