PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57013.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 346aa    MW: 37886.3 Da    PI: 5.5703
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.49.4e-2947141186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt+qe+l+Li+++r  e+r+rrg+         +++p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e+  +++++s +++ ++l+
  GAY57013.1  47 RWTRQEILVLIQGKRVAENRVRRGRaagmgfgsgQIEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESHVKDGTESFWVMRNDLR 141
                 8**********************97778888888*********************************************9999999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MALEQLSLAR TPVDGETDGV NNGVEQRTTT ASIDGGDDGC KAPRLPRWTR QEILVLIQGK  60
RVAENRVRRG RAAGMGFGSG QIEPKWASVS SYCKRHGVNR GPVQCRKRWS NLAGDFKKIK  120
EWESHVKDGT ESFWVMRNDL RRERKLPGFF DREVYDILDG AATVASSASP GLGLALAPAE  180
ETTTDEAVFD SGRSAAADDG LFSDFEPEET TGTPVKDDAP AEAAPAAAKP ISATMPIPEK  240
QYQPNLRGCH GQGTTTEKQP APEIGSTSQD GRKRKRFTVD GDEEMSNMQY QLIDVLERNG  300
KMLTAQLEAQ NNSFQLDREQ RKDHADSLVA VLNKLADALG RIADKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-124Trihelix family protein