PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56873.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 434aa MW: 48280.4 Da PI: 4.4122

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.8	3e-51	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtd el+++yLk+kv g+k+ + e+i+evdiyk+ PwdLp k ++++++ +wyfF++r+kkya+g r nrat+ gyWk+tgkd++v ++ GAY56873.1 6 LPPGFRFHPTDVELIKYYLKRKVMGRKFGF-EAIAEVDIYKHAPWDLPdKsSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQY-NN 102 79***********************999.89**********96346677888*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 e+vg+ ktLvf++g+ap+g +tdWvmheyr+ GAY56873.1 103 EVVGMIKTLVFHRGKAPRGDRTDWVMHEYRI 133 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MGKTSLPPGF RFHPTDVELI KYYLKRKVMG RKFGFEAIAE VDIYKHAPWD LPDKSSLRSG 60 DLKWYFFCPR EKKYANGARM NRATEFGYWK TTGKDRPVQY NNEVVGMIKT LVFHRGKAPR 120 GDRTDWVMHE YRIDEPGLSE RGVVQDAYVL CIVFQKDGPG PRNGAQYGAP FREEDWENDE 180 DVDCVDVISS AVLPPPVPSQ NSPVAESSHI PERLCIGTSE SCLSDTIPPT SNMLPPVPVI 240 NDVSREVAQD LSEDDILAML AYFTEDNNLI SNENGQIEQY DNVHDGNIEA SPRLDGVDIY 300 NDLGDLENMV GFSGGEYDFF PAENSNYNLD GAILGDNASF IELHDLDAPL NCPAEAREPE 360 QAHCNGPYTD QKCYNSEQSC YNVNPCFSQS PSMLPQDSVQ RNANEAPLNH GAAKLSVGSS 420 RASEDSRSGG SHCP

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MGKTSLPPGF RFHPTDVELI KYYLKRKVMG RKFGFEAIAE VDIYKHAPWD LPDKSSLRSG  60
DLKWYFFCPR EKKYANGARM NRATEFGYWK TTGKDRPVQY NNEVVGMIKT LVFHRGKAPR  120
GDRTDWVMHE YRIDEPGLSE RGVVQDAYVL CIVFQKDGPG PRNGAQYGAP FREEDWENDE  180
DVDCVDVISS AVLPPPVPSQ NSPVAESSHI PERLCIGTSE SCLSDTIPPT SNMLPPVPVI  240
NDVSREVAQD LSEDDILAML AYFTEDNNLI SNENGQIEQY DNVHDGNIEA SPRLDGVDIY  300
NDLGDLENMV GFSGGEYDFF PAENSNYNLD GAILGDNASF IELHDLDAPL NCPAEAREPE  360
QAHCNGPYTD QKCYNSEQSC YNVNPCFSQS PSMLPQDSVQ RNANEAPLNH GAAKLSVGSS  420
RASEDSRSGG SHCP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	1e-109	NAC family protein