PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56808.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 599aa MW: 65128.9 Da PI: 6.9352

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.4e-31	328	386	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ GAY56808.1 328 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 386 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MAKGSGLSID HNISDPIAGK NKNFFLCHQP TVLNSFSDDH HHFHKFHYLM DAKRSPATTP 60 STIQFPVCLN HDEDSPQQSS DDHHHHNKRK VIDEMDFFTD KNTHSRDHHH YKDSKLELNV 120 NTGLNLLTTN TSSDHSTVDD GISTNMEDKK AKNEYAVVQA ELERVNAENQ RLKDMVNEVT 180 NNYNALQLQL MAFMQHHNAK AADENSDGRQ VEEKKGQLAA PRRFIDLGLG VNTAGTADEP 240 ALSSSEGRSR DLGGSPVNGN SNNNEESNVL FGQDKKEFVK RDDSPDRNYG PNKVPKFSSS 300 SKNVDQTEAT MRKARVSVRA RSEAPMINDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP 360 VRKQVQRCAE DRTILITTYE GNHNHPLPPA AMAMASTTSS AARLLLSGSM SSADGLMNAN 420 FLARTLLPCS SSMATISASA PFPTVTLDLT QTPNPSNVQR SPNQFQVPFP NPSHNFANGA 480 AAAAAGSLLP QIFGQALYNQ SKFSGLQMSQ DMDPSQLGNQ SQLPSPAMQQ GQQHNSLADS 540 VSAATAAIAA DPNFTAALAA AITSIINGGT PQSNNVTNNE NTDDLATTTN GNVKFSQSS

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MAKGSGLSID HNISDPIAGK NKNFFLCHQP TVLNSFSDDH HHFHKFHYLM DAKRSPATTP  60
STIQFPVCLN HDEDSPQQSS DDHHHHNKRK VIDEMDFFTD KNTHSRDHHH YKDSKLELNV  120
NTGLNLLTTN TSSDHSTVDD GISTNMEDKK AKNEYAVVQA ELERVNAENQ RLKDMVNEVT  180
NNYNALQLQL MAFMQHHNAK AADENSDGRQ VEEKKGQLAA PRRFIDLGLG VNTAGTADEP  240
ALSSSEGRSR DLGGSPVNGN SNNNEESNVL FGQDKKEFVK RDDSPDRNYG PNKVPKFSSS  300
SKNVDQTEAT MRKARVSVRA RSEAPMINDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP  360
VRKQVQRCAE DRTILITTYE GNHNHPLPPA AMAMASTTSS AARLLLSGSM SSADGLMNAN  420
FLARTLLPCS SSMATISASA PFPTVTLDLT QTPNPSNVQR SPNQFQVPFP NPSHNFANGA  480
AAAAAGSLLP QIFGQALYNQ SKFSGLQMSQ DMDPSQLGNQ SQLPSPAMQQ GQQHNSLADS  540
VSAATAAIAA DPNFTAALAA AITSIINGGT PQSNNVTNNE NTDDLATTTN GNVKFSQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-112	WRKY family protein