PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY56767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 681aa MW: 74487.1 Da PI: 5.5944 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 93.1 | 2.2e-29 | 212 | 265 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++WtpeLH++Fv av+qL G +kA+Pk+il+lm+v+gLt+e+v+SHLQk+Rl GAY56767.1 212 KPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 40.5 | 6.3e-13 | 214 | 264 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT+e++ ++v av+qlG + +k+I m+ +g+t++++ s++qk++ GAY56767.1 214 RVVWTPELHRKFVGAVNQLGVDkaVPKKILDLMNvEGLTRENVASHLQKFR 264 678**********************************************97 PP | |||||||
3 | Response_reg | 78.1 | 3.1e-26 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ +++l+++l+ +y ev+++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll++ e +lp+i+++a+g+ +++ + + Ga GAY56767.1 26 VLAVDDDPTCLKVLENFLRACQY-EVTVTNQAVTALKMLRENRnnFDLVISDVHMPDMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGAC 120 799********************.***************999889**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + GAY56767.1 121 DYLLKPVRIEELKN 134 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MTAEERMGSA GCEDGPIDKF PIGMRVLAVD DDPTCLKVLE NFLRACQYEV TVTNQAVTAL 60 KMLRENRNNF DLVISDVHMP DMDGFKLLEH VGLEMDLPVI MLSAYGDTKL VMKGITHGAC 120 DYLLKPVRIE ELKNIWQHVI RRKKVGPKDQ NKLLNQENSR VGAGEGGQGA MSTGNSDQNG 180 KSNRKRKDQD GDEDEDGDDD GHENEDSTTQ KKPRVVWTPE LHRKFVGAVN QLGVDKAVPK 240 KILDLMNVEG LTRENVASHL QKFRLYLKRL SNETPQAGMV AALGSKDSSY LRIGALDGFG 300 DLRSLNSPGR LSSSAISSSY VPGNMFGRLN STSGLSMHGI ASSGMIQPGH SQSFNTSFNT 360 IGKIQQAMFP ANRISNLFQG VRTSSELNQL PQSKSTTQIG DFNHINSPTT SMAATGFTDA 420 TVAVGSSSSS VSTSSSNIMM LQGNLHQAHS RDAYGNQSSL SVASLNQESF DVGVRNSSNF 480 LDHSRCNESW QDAVQLSSNS LPLSEPFIHD QMPPNLRNTL SSTSCLDISS SMATSAHLED 540 SRGDLSCQPG LIGNVIQNYT SKQQWLEHKQ GYNQNLNNPF SNVNTLLSGN CTMGPFSQSM 600 DQSNSPYIAQ LTGVEKAPLN TKLRSNDDFL LEQSKSHDGF IQNNYDPMDD MMSGILKRDS 660 NETILMDGEL GFDAYSLSSC M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-117 | ARR-B family protein |