PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56641.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 497aa MW: 55314.5 Da PI: 5.2098

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.7	6.1e-36	18	110	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+++ed+++++++sws+++nsf+v++ ef++++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ eF+++ F +g+k+ll++i GAY56641.1 18 FLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------YEFANEGFLRGQKHLLKSIS 105 9***************************************************************99.........78**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + GAY56641.1 106 RRKPA 110 *9965 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MESMSSSSAA NGNSLPPFLS KIYDMVEDPS TNDIVSWSSS NNSFIVWKVA EFSRDLLPKY 60 FKHSNFSSFV RQLNTYGFRK VDPDRYEFAN EGFLRGQKHL LKSISRRKPA QVHGQQQPKL 120 QNSSVGACVE VGKYGLEEEV EILKRDKNVL MQELVRLRQQ QQATDRQLHT VGQRVQVMEQ 180 RQQQMMSFLA KAMHSPSFLS QLVQQQNDSN RHISGSNKKR RLPRQDEENT VGAYDSSIPN 240 GQIVKFQPSM NEAAKAMLHQ IMKMNSPSRL EPTMSNLSTF LIDNIPSANA LENGHSSSQI 300 SGVTLSEVPP NSGQSNMSTE SRFHVPSSAI SEIQCSPCVS DSVKVNPTQE KSKHNSGNDT 360 VLPNFPQLQG IASESTISIP DVNFVLSGNG NAENLDPTAL DGTMSIDADA FSPDHDVDVS 420 PDGIHKLPRI DDAFWEEFLT ASPLPGDTDE INSSPLESGM TSELEQQPEQ ANGWDNFQHM 480 DHLTEQMGLL TSESRRL

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MESMSSSSAA NGNSLPPFLS KIYDMVEDPS TNDIVSWSSS NNSFIVWKVA EFSRDLLPKY  60
FKHSNFSSFV RQLNTYGFRK VDPDRYEFAN EGFLRGQKHL LKSISRRKPA QVHGQQQPKL  120
QNSSVGACVE VGKYGLEEEV EILKRDKNVL MQELVRLRQQ QQATDRQLHT VGQRVQVMEQ  180
RQQQMMSFLA KAMHSPSFLS QLVQQQNDSN RHISGSNKKR RLPRQDEENT VGAYDSSIPN  240
GQIVKFQPSM NEAAKAMLHQ IMKMNSPSRL EPTMSNLSTF LIDNIPSANA LENGHSSSQI  300
SGVTLSEVPP NSGQSNMSTE SRFHVPSSAI SEIQCSPCVS DSVKVNPTQE KSKHNSGNDT  360
VLPNFPQLQG IASESTISIP DVNFVLSGNG NAENLDPTAL DGTMSIDADA FSPDHDVDVS  420
PDGIHKLPRI DDAFWEEFLT ASPLPGDTDE INSSPLESGM TSELEQQPEQ ANGWDNFQHM  480
DHLTEQMGLL TSESRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-141	HSF family protein