PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56549.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 411aa MW: 47195.4 Da PI: 4.3888

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	48.7	2e-15	15	60	2	47
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkh 47 Fl+k ye+++de+++++isw ++++sfv++d +ef+ ++Lp+yFkh GAY56549.1 15 FLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLPRYFKH 60 9********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MVKSNDDGSN SVAPFLNKCY EMVDDESTDS IISWGQSNES FVIWDVTEFS VQLLPRYFKH 60 IDSPMVAISE MRRGRAIILL VICMAERTDM ISFSGFRKID TDRWEFANDG FVRDQKHLLN 120 NICRRKNTQG SEQRKSLQQS EKLVEPCEKI DHSALWKEVE NLKAGKNALT QELLKLRQYQ 180 ETADNKLVLL RDRVQGMEKS QQQMLSFLVM AMQNPSFLVQ LLQPKENNWR MAEAGTMLEE 240 VTEVGEPIAS DNMLVRYHPP IDETPKPVLK PVTDSGNQMA SDTSDGMKDV FMNIDFLKML 300 MDENQAPFIP LDLHNDGEWE KLLLANPILD NSEDTQVDKD KEVDKEGHTD VDMEAEPAVS 360 GSELERLNNL ELLLQELDKS QNFDNELENA RHLEFLTQKI ELLASESNYK L

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MVKSNDDGSN SVAPFLNKCY EMVDDESTDS IISWGQSNES FVIWDVTEFS VQLLPRYFKH  60
IDSPMVAISE MRRGRAIILL VICMAERTDM ISFSGFRKID TDRWEFANDG FVRDQKHLLN  120
NICRRKNTQG SEQRKSLQQS EKLVEPCEKI DHSALWKEVE NLKAGKNALT QELLKLRQYQ  180
ETADNKLVLL RDRVQGMEKS QQQMLSFLVM AMQNPSFLVQ LLQPKENNWR MAEAGTMLEE  240
VTEVGEPIAS DNMLVRYHPP IDETPKPVLK PVTDSGNQMA SDTSDGMKDV FMNIDFLKML  300
MDENQAPFIP LDLHNDGEWE KLLLANPILD NSEDTQVDKD KEVDKEGHTD VDMEAEPAVS  360
GSELERLNNL ELLLQELDKS QNFDNELENA RHLEFLTQKI ELLASESNYK L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-100	HSF family protein