PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 202aa MW: 22984.7 Da PI: 7.9982 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.2 | 2.5e-17 | 23 | 73 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++eq+++Le+ F ++++++e + +LA++lg++ rqV vW+qN+Ra++k GAY55845.1 23 RLNQEQVRVLERSFTTKKKLDTELKLKLANQLGVPARQVAVWYQNKRARWK 73 689***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 98.7 | 5.5e-32 | 21 | 111 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 k+rl++eqv++LE+sF++++kL++e K +la++Lg+ +rqvavW+qn+RAR+kt+ lE dy++++ ++++ ++++rLek+v+ L+eel++ GAY55845.1 21 KKRLNQEQVRVLERSFTTKKKLDTELKLKLANQLGVPARQVAVWYQNKRARWKTQSLELDYNTIQVKLENALADKRRLEKDVKLLKEELRQ 111 99*************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MDIADTQQNQ KHPPPNKLNI KKRLNQEQVR VLERSFTTKK KLDTELKLKL ANQLGVPARQ 60 VAVWYQNKRA RWKTQSLELD YNTIQVKLEN ALADKRRLEK DVKLLKEELR QAQEILFAKL 120 MTSNNNNNQE AVEAITCNNN SNYSSATSCS AEKAGSCSSF SLLHEEYHVH GNDHDHDQGL 180 QIDHELFACL IGNGGSAWGS NE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 5e-22 | HD-ZIP family protein |