PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HSF | ||||||||
Protein Properties | Length: 367aa MW: 41726.1 Da PI: 4.6483 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 113.5 | 1.4e-35 | 48 | 139 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d++++e++sws+ g sfvv+d++ f++++Lp++Fkhsnf+SFvRQLn+YgF+k++ ++ weF+++ F +g+++ll++ik GAY55741.1 48 FLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFKHSNFSSFVRQLNTYGFRKIDPDR---------WEFSNEGFLRGERHLLKNIK 135 9****************************************************************999.........******************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k GAY55741.1 136 RRKA 139 *986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MNPYYIIKEE QPGGIPSESG ADEAAVMTMM MAAPQPMEGL HDTGPPPFLT KTYEMVDDPN 60 TNEVVSWSRG GVSFVVWDPH AFSTSLLPRH FKHSNFSSFV RQLNTYGFRK IDPDRWEFSN 120 EGFLRGERHL LKNIKRRKAP SQPLPPPQAL GPCVELGRFG LDGEFERLIR DKQFLMMELV 180 KLRQQQQNTR AYLQAMELRL EGTEKKQQQM MSFLARAMQN PAFLQQLVQQ KEKRKELEEA 240 MTKKRRRPID QGPIGAGVAG SSDFGEGMSS VKAEPLEYGD YGFEMSELEA LALEMQGYGR 300 TRSEQEGQQE LEPPESGARE LDEGFWEELL NERFEGELDM PGSEVGDDED VTVLIDRFGY 360 LGSSPKQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 137 | LKNIKRR |
2 | 233 | 247 | KRKELEEAMTKKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 1e-123 | HSF family protein |