PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55664.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 362aa    MW: 39860.1 Da    PI: 9.2961
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.8e-13290335655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIk+Lq
  GAY55664.1 290 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 335
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MDSSTNHNYH QQSNPGLSRF NSAPTALLVN FTDSLESGGV NKSSFESERL ISRFMNSGGD  60
NSNNSSFQEF EVKSPVSYGN SQQSCSGLPP HYPRQSSAMD HNSYDLFLDQ SSRVKSVNSN  120
LVRQSSSPAG LFAKLSAQNG YASTKEVGSY GGVNGSNGDL SPSTKRLKSQ ISIPSRIPSS  180
LGMLSRVSEV ESDGPTHGKV RNGNGDAQFY STGFSYGSWN DSSHFTESFT DMKREQGNGE  240
LGNSVHMLSH HLSLPKTSAE MAAVEKFLQF QDSVPCKIRA KRGCATHPRS IAERVRRTRI  300
SERMRKLQEL VPNMDKQTNT ADMLDLAVDY IKDLQNQFKT LSDNRAKCKC SKIQKPVENQ  360
IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-100bHLH family protein