PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26976.2 Da PI: 6.52 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.8e-20 | 99 | 149 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + k +r++lg+f ta eAaka+++a+ k++g GAY55627.1 99 HYRGVRRRP-WGKYAAEIRDP---NkKGTRVWLGTFNTAVEAAKAYDNAAFKMRG 149 7********.**********9...4345*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MAAGHHHHQD HEALTLERIS QYLLNDLTPM DSYSFISNLP QQNPASTDEE ILVQKTSSTL 60 SQRKPSSINV RIPPPTTSIF KLKDEDKDFE VTDDYKERHY RGVRRRPWGK YAAEIRDPNK 120 KGTRVWLGTF NTAVEAAKAY DNAAFKMRGR KAILNFPLEI GEISLDSDEV QQVDCGKKRK 180 YEENEEFERK VTVKKEETVS GGVGLGPLTP SSWTGFWDDG NGIFSVPPLS PCFGQLGVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 4e-61 | ERF family protein |