PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29146.3 Da PI: 10.0524 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.1 | 5.1e-34 | 20 | 160 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyW 83 lp+G++F+Ptd+el+ e+L++kv+++ ++ e +++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + +W GAY55586.1 20 LPAGVKFDPTDQELL-EHLEAKVRADArklhplID--EfipTLEGEnGICYTHPEKLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHtdeqggETRW 114 799************.99*****999956643322..22222333336**********.555555677******************744456555778* PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l GAY55586.1 115 HKTGKTRPVFI-GGKVKGYKKILVLYtnYGKQKKPEKTNWVMHQYHL 160 ***********.9*************6658999************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MVIMIRWPFF KARIHDLPGL PAGVKFDPTD QELLEHLEAK VRADARKLHP LIDEFIPTLE 60 GENGICYTHP EKLPGVSKDG LIRHFFHRPS KAYTTGTRKR RKVHTDEQGG ETRWHKTGKT 120 RPVFIGGKVK GYKKILVLYT NYGKQKKPEK TNWVMHQYHL GGNEEEKDGE LVVSKVFYQT 180 QPRQCGNSVI KDSSSLPPKF NINKGQSGLD GLKNNPGVVD YYNPPFIAFD QGGGQNRASP 240 PQALIPPHFA AHDTSFIP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-115 | NAC family protein |