PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55585.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 310aa    MW: 34500.7 Da    PI: 9.3308
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.58.2e-34722121128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyW 83 
                 lp+G++F+Ptd+el+ e+L++kv+++       ++  e   +++   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++      + +W
  GAY55585.1  72 LPAGVKFDPTDQELL-EHLEAKVRADArklhplID--EfipTLEGEnGICYTHPEKLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHtdeqggETRW 166
                 799************.99*****999956643322..22222333336**********.555555677******************744456555778* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+++v+  +g+++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  GAY55585.1 167 HKTGKTRPVFI-GGKVKGYKKILVLYtnYGKQKKPEKTNWVMHQYHL 212
                 ***********.9*************6658999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MTWCNDCSDV QTIERISSPP SSSTNNNNNN NNNTSNSSSS AKAKNCLVRS CPSCGHQIKC  60
NEQARIHDLP GLPAGVKFDP TDQELLEHLE AKVRADARKL HPLIDEFIPT LEGENGICYT  120
HPEKLPGVSK DGLIRHFFHR PSKAYTTGTR KRRKVHTDEQ GGETRWHKTG KTRPVFIGGK  180
VKGYKKILVL YTNYGKQKKP EKTNWVMHQY HLGGNEEEKD GELVVSKVFY QTQPRQCGNS  240
VIKDSSSLPP KFNINKGQSG LDGLKNNPGV VDYYNPPFIA FDQGGGQNRA SPPQALIPPH  300
FAAHDTSFIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-129NAC family protein