PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55584.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 269aa MW: 30288.4 Da PI: 9.0122

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109	5.7e-34	72	212	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyW 83 lp+G++F+Ptd+el+ e+L++kv+++ ++ e +++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + +W GAY55584.1 72 LPAGVKFDPTDQELL-EHLEAKVRADArklhplID--EfipTLEGEnGICYTHPEKLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHtdeqggETRW 166 799**********.99*999956643322..22222333336******.555555677***************744456555778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l GAY55584.1 167 HKTGKTRPVFI-GGKVKGYKKILVLYtnYGKQKKPEKTNWVMHQYHL 212 *********.9*********6658999**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MTWCNDCSDV QTIERISSPP SSSTNNNNNN NNNTSNSSSS AKAKNCLVRS CPSCGHQIKC 60 NEQARIHDLP GLPAGVKFDP TDQELLEHLE AKVRADARKL HPLIDEFIPT LEGENGICYT 120 HPEKLPGVSK DGLIRHFFHR PSKAYTTGTR KRRKVHTDEQ GGETRWHKTG KTRPVFIGGK 180 VKGYKKILVL YTNYGKQKKP EKTNWVMHQY HLGGNEEEKD GELVVSKVFY QTQPRQCGHW 240 FLILATNPSP ELCCTMLSLR TIICIAFAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-129	NAC family protein