PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55581.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HB-other | ||||||||
Protein Properties | Length: 1758aa MW: 197267 Da PI: 5.2129 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58 | 1.7e-18 | 21 | 77 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+ ++ ++yps++ r+eL+++lgL++rq ++WF+ rR k++k GAY55581.1 21 KTKRKMKTASQLEILEKTYAVESYPSEALRAELSAQLGLSDRQLQMWFCHRRLKDRK 77 6799***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1758 aa Download sequence |
MEAASEAEEK KKKKPLEAEV KTKRKMKTAS QLEILEKTYA VESYPSEALR AELSAQLGLS 60 DRQLQMWFCH RRLKDRKAPT AKRQPKDFQS LVPAGEKELA GSELVRGGMA VQRFYEVPMA 120 PMLPFPLPQR NIAEMRAIAF VESQLGEPLR EDGPILGVEF DSLPPDAFGR PIGPAAMGHQ 180 KHSVRPLEAK EYERLDVKPF KDMFTIHPQG ATRTVHEYKF LPEQPTVRSE THEKAASSYP 240 YGSPADGSTA RNSSLRAGHP FMHGSEQISS GYGFPGQLPN LNLLSHQGRH SHLLPSVSGE 300 YENILRKNSF ISAGMDAHVG GQPITAMDNA FISSDRRVSH DEDVSRTEKK RKSEEARIAR 360 EVEAHEKRIR KELEKQDILR RKREEQIRKE MERQDRERRK EEERLLREKL REEERYLREQ 420 RRELERREKF LQKESIRAEK RRQKEELRRV KEAERLKVAN ERAVARRIAK ESMALVEDER 480 LELMELAASS KGLPTIVSLD FETLQNLDLF RDRPCTFPPK SVQLKRPFAV QPWNDSEDNI 540 GNLLMVWRFL ITFADVLGLW PFTLDEFVQA FHDYDPRLLG EIHVALLRSV IKDIEDAAKT 600 PFTGLGANQN SAVNPGGAHP QIVEGAYAWG FDIRSWQLHL NALTWPEILR QFALSAGFGP 660 QLNKRNIEKM YPHDNNEGND GENIISNLRN GSAVGNAVAI MHEMGLSNLR RSRHRLTPGT 720 VKFAAFHVLS LEGSEGLTIL EVADKIQKSG LRDLTTSKTP EASIAAALSR DTKLFERTAP 780 STYCVRAAYR KDPGDADAIL SAARERIRVF KRGFVDGEEA DDAERDEERD EDSDSDVPEV 840 PDVYDMDTDL NSKEETHESL EANSCGAKTP LGNREANIKG IESPQGDLGN SGRGLSSKNS 900 EDFDEIKGTG ALTDHCEDAA GISNAATPDQ THTDINESHP GEPWVQGLTE GEYSDLSVDE 960 RLSALVALIG VAIEGNSVRI ALEERLEAAN ALKKQMWAET QLDKRRIKED CMLKMQYSSY 1020 MGNKAEPSLA ISSADGRQSP LVTVDDKSNG MLVDLNLQQG QFGEPQKDQN CNTSMPPEGN 1080 QDYPVGPDNL VNQQSAYAAE KSRMQLKSYI GQKAEETYVC RSLPLGQDRR RNRYWRFITS 1140 MSENDPGCGR IFVELCDGRW RLIDSEESFD ALLTSLDVRG LRESHLHSVL QMIEMSFKET 1200 VRRNLQHVTT EVQNQETVKA EVIERASCPD YTGTDNPSNI VCDSDSEISD TSTSFSIELG 1260 RDDVLRNDAL KRYQDYERWM WKECVNSSIL CAMEYGKKRC KQVLGVCDYC HDLYFFEDSH 1320 CPSCHKTFDT SKRYLNFSEH VAQCQGKLKM NPAWSSCTSF SSPLRIRLLK VLLALFEGSV 1380 PSEAFQSIWN DSYRNSWGMK LNSSLSADSL VQILTQLENA IKRDYLSSNF ETTSEFLDSS 1440 NSSACTFNSS SSPEIVSVLP WVPITTAAVG LRLMELDRSI AYLPHQRVEF QKEKREGNLM 1500 LPSKYAAVKN TRDGEDQVNY LQVEEANRVG VGIGFAAPSH GRGICGGARG CLNTGRSQKR 1560 VAGSRRDSGK RSTNTKSGRL VLVLKGQSHG QGSRKRGRRS ARSRRKSTKR VVVEKDAPKQ 1620 SIFDKPRDLA GDGWNRDEIP RLQVDDAENA SISGRSGYGE ENGQATGDEY NDMIDEYAGG 1680 FNSRSNDLQE GSDDIVDGDE EDDEDEMGDG GAEDEQGYLD VEEYVNEESD EEGIRDGDGG 1740 QIGDPDEGTG ASSSDLSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 349 | 375 | KKRKSEEARIAREVEAHEKRIRKELEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44180.1 | 0.0 | HB-other family protein |