PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 321aa MW: 35655.8 Da PI: 8.2708 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.5 | 7.3e-30 | 166 | 225 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+ GAY55479.1 166 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQSVLVATYEGEHNHP 225 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MDSFSWVDTS LDLNSNPLRL NDEVLAPAKK ELQGDFSGFG NKDSVKQEIN TGALVAELNR 60 VSAENKKLTE TLTALCESYN ALRNQLMDYM SKNPEISKEL FDSSSKKRKS ESSNNNNNNV 120 ALTMGNSESS STDEESCKKP REEHIKAKIS RVHYRTEPSD TTSLVVKDGY QWRKYGQKVT 180 RDNPSPRAYF KCSFAPSCPV KKKVQRSVED QSVLVATYEG EHNHPLPCHM DAASGSTSRC 240 VTAGSVPCST GQTITLDLTR SNTKSSNEDK ALKPRIDTSP EVRNFLVEQM ASSLTKDPNF 300 TTALAAAISG KIFQHNPREK W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-97 | WRKY family protein |