PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55269.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 478aa MW: 52135.4 Da PI: 6.6144

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.8	5.8e-39	126	185	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+ GAY55269.1 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MRQESKDPAI RLFGKKIAFP SDGEVPVIFS EELPSPAAKE ECSIEAEEEK TEEDSSAVKA 60 AETTQQDDTT PPNIDESKIP ESPEANVNPK TPSIDDETAK SKAAKSEKSQ SDASNSNSQE 120 KTLKKPDKIL PCPRCNSMDT KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR 180 KNKNCASQYR HITISEALQA ARIDAPNGIS HPSVKSNGRV LSFGLDAPIC DSMASVLNLA 240 EKKVLNGTQN GFHGFQEQEI PVPCRGGENG DDCSSGSSIT VSNPMEEVGR NGMQEPLMRS 300 INGFPSPIPC LPGVPWPYPW NASVPPPAFC PSGFPMSFYP AAFWNCGIPS TWNMPWISPQ 360 SSPNQKSPSS GPNSPTLGKH SRDADMIKSE NMDKEELSKE KNRCVLVPKT LRIDDPNEAA 420 KSSIWATLGI KNESLAGGRL FKGLQSKSDE KSHMAETSPV LRANPAALSR SLNFHEST

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MRQESKDPAI RLFGKKIAFP SDGEVPVIFS EELPSPAAKE ECSIEAEEEK TEEDSSAVKA  60
AETTQQDDTT PPNIDESKIP ESPEANVNPK TPSIDDETAK SKAAKSEKSQ SDASNSNSQE  120
KTLKKPDKIL PCPRCNSMDT KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR  180
KNKNCASQYR HITISEALQA ARIDAPNGIS HPSVKSNGRV LSFGLDAPIC DSMASVLNLA  240
EKKVLNGTQN GFHGFQEQEI PVPCRGGENG DDCSSGSSIT VSNPMEEVGR NGMQEPLMRS  300
INGFPSPIPC LPGVPWPYPW NASVPPPAFC PSGFPMSFYP AAFWNCGIPS TWNMPWISPQ  360
SSPNQKSPSS GPNSPTLGKH SRDADMIKSE NMDKEELSKE KNRCVLVPKT LRIDDPNEAA  420
KSSIWATLGI KNESLAGGRL FKGLQSKSDE KSHMAETSPV LRANPAALSR SLNFHEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-116	Dof family protein