PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54287.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 344aa MW: 39366 Da PI: 7.738

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	83	136	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH +Fv+ave+LGG+e+AtPk++l+lm+vkgL+++hvkSHLQ+YR+ GAY54287.1 83 PRLRWTQDLHLAFVHAVERLGGQERATPKSVLQLMNVKGLSIAHVKSHLQMYRS 136 8****************************************************7 PP
2	Myb_DNA-binding	51.5	2.3e-16	84	135	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ GAY54287.1 84 RLRWTQDLHLAFVHAVERLGGQeraTPKSVLQLMNvKGLSIAHVKSHLQMYR 135 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MENVTDTVEI SSDDNKSNES GTQAFQKCSS FDLNEEAAMD DAENDNITNV PYSGGTSIIS 60 TNTTTEGKEI ITMARQYVRS KMPRLRWTQD LHLAFVHAVE RLGGQERATP KSVLQLMNVK 120 GLSIAHVKSH LQMYRSKKLD ASGQVLSNRI MQEGHDILEM YRKFNQHGRF RMDNRNYMSS 180 PLLEQPCDFK PYSSRYHPWA QVGHCTRYNP IIFQNEKKCF PYETIGNQGK CRNNSLSISW 240 DGSCISDQVQ YSKFQTASML EAQVLHGTEA GQHAQEMNSC KKLKRFKEND WSADLQLSLC 300 HNKYDNCVGM NNNNQQQSTK EIDTILSLSS WSSQLCKTQR FHQN

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MENVTDTVEI SSDDNKSNES GTQAFQKCSS FDLNEEAAMD DAENDNITNV PYSGGTSIIS  60
TNTTTEGKEI ITMARQYVRS KMPRLRWTQD LHLAFVHAVE RLGGQERATP KSVLQLMNVK  120
GLSIAHVKSH LQMYRSKKLD ASGQVLSNRI MQEGHDILEM YRKFNQHGRF RMDNRNYMSS  180
PLLEQPCDFK PYSSRYHPWA QVGHCTRYNP IIFQNEKKCF PYETIGNQGK CRNNSLSISW  240
DGSCISDQVQ YSKFQTASML EAQVLHGTEA GQHAQEMNSC KKLKRFKEND WSADLQLSLC  300
HNKYDNCVGM NNNNQQQSTK EIDTILSLSS WSSQLCKTQR FHQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-35	G2-like family protein