PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54261.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 280aa MW: 31245.3 Da PI: 5.7017

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	76	122	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+riN +++Lr+l+P a +K++Ka+ L++++ +k+L GAY54261.1 76 KNHIEAERNRRKRINGHLDTLRSLIPGA-----TKMDKATLLTEVISQLKEL 122 589**********************9.....9*********9988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MLAMDPYFWS SCRNDNGVEI LTDEFVVNNG FQGQSRNGSS SHSSLVLDSE RGELVEANVK 60 LQRKGVSEDR SVAALKNHIE AERNRRKRIN GHLDTLRSLI PGATKMDKAT LLTEVISQLK 120 ELDKNATEAT EGFLIPTDID EVKVEQQEDG LDGAPYSIKA SLCCNYKPGL LSDLRRVLEA 180 LHLSIVKAEI ATLEGRMKNI FVMASCKELN FENTEVCQSL VSSVHQAIRS VLDKFSATEE 240 FLLGARLSNK RRRVSLFDSS LSSSSDYLWD YVHNYLVPAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	254	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	2e-31	bHLH family protein