PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54094.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 360aa MW: 41845.9 Da PI: 5.3866

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	7.8e-36	40	132	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+i+ed +++++isws+ +nsfvv+d++ f+ ++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+++ll++i+ GAY54094.1 40 FLTKTYDIVEDCNTNHIISWSRGSNSFVVWDPQAFSITLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRNLLKNIR 127 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ GAY54094.1 128 RRKTT 132 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MHPTGRVERE EFIGASSSSA SYSAPPQPRE GLHDAGPPPF LTKTYDIVED CNTNHIISWS 60 RGSNSFVVWD PQAFSITLLP KYFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANEGFLRGQR 120 NLLKNIRRRK TTQSSASQQA LDACVEVGRF GLDGEVDRLR RDKQVLMMEL VKLRHQQQNT 180 REYLQLMEQK LRRTEMKQQH MMSFLARAMQ NPSFVQQLAQ QKDRRKEFED MINRKRRRHI 240 DQGPGEIDVG DLGQGEVDIP FVKIEPEEYG DLAELGLSEL DRLAMDMQAR LSERQRNPDD 300 EFVERGEEHG SKNKFTIDQR FWEDFLNEDV EEEMLAGEGE GDENVRVLVE QLGFLSSSPK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MHPTGRVERE EFIGASSSSA SYSAPPQPRE GLHDAGPPPF LTKTYDIVED CNTNHIISWS  60
RGSNSFVVWD PQAFSITLLP KYFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANEGFLRGQR  120
NLLKNIRRRK TTQSSASQQA LDACVEVGRF GLDGEVDRLR RDKQVLMMEL VKLRHQQQNT  180
REYLQLMEQK LRRTEMKQQH MMSFLARAMQ NPSFVQQLAQ QKDRRKEFED MINRKRRRHI  240
DQGPGEIDVG DLGQGEVDIP FVKIEPEEYG DLAELGLSEL DRLAMDMQAR LSERQRNPDD  300
EFVERGEEHG SKNKFTIDQR FWEDFLNEDV EEEMLAGEGE GDENVRVLVE QLGFLSSSPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	238	RRKEFEDMINRKRRR
2	234	238	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-135	HSF family protein