PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53937.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 356aa    MW: 39280.6 Da    PI: 6.6742
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.62.6e-28186246259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqKe+ +s++prsYYrCt++   +Cp+kk+v+r ++dp+++e+ Y g+H+++
  GAY53937.1 186 EDGYTWRKYGQKEILNSKYPRSYYRCTHQklyKCPAKKQVQRLDDDPSTFEVAYYGDHTCH 246
                 7****************************9999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MEEIFSLILN GCKLAKDLEA NLPNIANQPE TISRSCDEII KSFCAAKERL NAAHHHQAPA  60
ALFYPPAAAA ETLFHEQQQQ QIIDASLQEW LRSSVTQTMS LMQTQHFVGR TPFHIGEMGA  120
KEMEGTSTTR LRSFGGDHHH HNVQPMDVSD SGRASSSSQP RHRRSGNART TTVPAPQIGN  180
TEIPPEDGYT WRKYGQKEIL NSKYPRSYYR CTHQKLYKCP AKKQVQRLDD DPSTFEVAYY  240
GDHTCHMSAT APSMVPASSS AEITQGMTTQ QSVTVQQPSS TSNIGRWLTM DVAAGGSSTG  300
AGPSTVRYER EVPGDYLVAN MADAMFNSGS SSSNSMEFLF SSSNVEEKGH PEDKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-52WRKY family protein