PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53648.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 367aa MW: 42899 Da PI: 6.1959

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.3	4.9e-56	21	150	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k GAY53648.1 21 VPPGFRFHPTDEELVDYYLRKKITSRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-K 117 69**************************.9***********954555442556**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLvfykgrap+g+k+dW+mheyrle GAY53648.1 118 QDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 150 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MQINCRTQEL EEEKMNAFSH VPPGFRFHPT DEELVDYYLR KKITSRRIDL DVIKDVDLYK 60 IEPWDLQELC RIGTEEQNEW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAIYSKQDL 120 IGMRKTLVFY KGRAPNGQKS DWIMHEYRLE TDENGTPQEE GWVVCRVFKK RITTMRKVSE 180 HESPCWYEDQ VSFMQDLDSP KPNSQHSNLA YHIPYGCKKE LDHHLQYQVP HEHFLQLPLL 240 ESPKLMQAAA NVNGNPMTAY GLDMNHASTL QQSSSLTQEE HMQQNLQFFG RDQNYEQAVD 300 QVTDWRVLDK FVASQLSQED SIAANNNVFR GNEQTNNVLV RQLMNKQEMA PENASTSTSS 360 CQIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MQINCRTQEL EEEKMNAFSH VPPGFRFHPT DEELVDYYLR KKITSRRIDL DVIKDVDLYK  60
IEPWDLQELC RIGTEEQNEW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAIYSKQDL  120
IGMRKTLVFY KGRAPNGQKS DWIMHEYRLE TDENGTPQEE GWVVCRVFKK RITTMRKVSE  180
HESPCWYEDQ VSFMQDLDSP KPNSQHSNLA YHIPYGCKKE LDHHLQYQVP HEHFLQLPLL  240
ESPKLMQAAA NVNGNPMTAY GLDMNHASTL QQSSSLTQEE HMQQNLQFFG RDQNYEQAVD  300
QVTDWRVLDK FVASQLSQED SIAANNNVFR GNEQTNNVLV RQLMNKQEMA PENASTSTSS  360
CQIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-136	NAC family protein