PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY53617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 394aa MW: 44036.2 Da PI: 6.9043 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.2 | 2.2e-30 | 229 | 287 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ GAY53617.1 229 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 287 8***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MDQTDQESEM EIDLSLKIDA QEDKKPENGD QNQKVHEDRL DKKYSRDKEG EAEELSLQDE 60 NKNKGELSVL QKEMNRMKKE NTLLRKVVEQ TMKDYYELQV KLTAIQQSSQ QMDISHAFLS 120 LKGNEKAFQE PKGAAQILET KNESPPSASS RDDFSKRIST ELGLSLRLQI EREEDKKDNK 180 EVIAASFPLL QKKVEQSDQF SGHPSHVALP PNRKARVSVR TRCQAATIND GCQWRKYGQK 240 IAKGNPCPRA YYRCTVAPGC PVRKQVQRCL EDMSILITTY EGTHNHPLPV GATAMASTAS 300 SAASFMLLDS SYNPLSNAGN NPGFFKASDL HYENAQMNSF AYPPSSRHVN PNDPSKGIVL 360 DLAASSYDLH HQQQLLFPVA ASSSSHSSSQ PGFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 6e-69 | WRKY family protein |