PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53283.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 496aa MW: 54485.6 Da PI: 7.4357

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55	2.7e-17	15	109	1	90
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka..eekewyfFskrdkkyatgk...rknratksgyWkatgkd 89 lppGfrF Ptdeel+ +yL++k+++++l + e i+++++yk++PwdLpk + + +++ w + +r k y+++ +ra s +W a gk+ GAY53283.1 15 LPPGFRFYPTDEELLGFYLRRKIQQRPLAI-EPIEQIGMYKYDPWDLPKcdqslT--GsvGHSTWETYNSRPKLYSRKYgvlGGHRA--SRRWWAAGKT 108 79************************99.89*************6455442..134777898888888888855422222333..3357777776 PP NAM 90 k 90 GAY53283.1 109 A 109 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MDVRNENDKL DEIMLPPGFR FYPTDEELLG FYLRRKIQQR PLAIEPIEQI GMYKYDPWDL 60 PKCDQSLTGS VGHSTWETYN SRPKLYSRKY GVLGGHRASR RWWAAGKTAD TALFYNEAAY 120 ADAVRRERNQ PICGESLPDF PSTALHGFRS WQFERSLQNG GKAGNQVQNG TEELANCKLR 180 SSDGGSSLKL ADAVGKKLKP IYGGSHPKCQ SMRPYYDGEA AFRSWHLGES SQNHSGTGKV 240 SICKKKFLDG ESSQQLQLPI VILKAEGPVN VSKQGKTICG GSHLDEFVCV SNYDEATAFR 300 SQQLDDESSQ EHTIIQVDRD SASSIGLAST PLNENASSSD SNHQSLRASA SPSEDRDVES 360 RVALSQAQSI REESPFDFDK LNKIILLLST EECLALLAIL FSGSSSLSTN ARILMRGAGI 420 SCAVGFYSSL GSSILKHIGK SEPAAPFLTA LGGVAAACGF TFLSCLFLPQ KLMLIFAGVV 480 CIMNIFILPF LFIKKN

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MDVRNENDKL DEIMLPPGFR FYPTDEELLG FYLRRKIQQR PLAIEPIEQI GMYKYDPWDL  60
PKCDQSLTGS VGHSTWETYN SRPKLYSRKY GVLGGHRASR RWWAAGKTAD TALFYNEAAY  120
ADAVRRERNQ PICGESLPDF PSTALHGFRS WQFERSLQNG GKAGNQVQNG TEELANCKLR  180
SSDGGSSLKL ADAVGKKLKP IYGGSHPKCQ SMRPYYDGEA AFRSWHLGES SQNHSGTGKV  240
SICKKKFLDG ESSQQLQLPI VILKAEGPVN VSKQGKTICG GSHLDEFVCV SNYDEATAFR  300
SQQLDDESSQ EHTIIQVDRD SASSIGLAST PLNENASSSD SNHQSLRASA SPSEDRDVES  360
RVALSQAQSI REESPFDFDK LNKIILLLST EECLALLAIL FSGSSSLSTN ARILMRGAGI  420
SCAVGFYSSL GSSILKHIGK SEPAAPFLTA LGGVAAACGF TFLSCLFLPQ KLMLIFAGVV  480
CIMNIFILPF LFIKKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	5e-21	NAC family protein