PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53282.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 287aa    MW: 32592.6 Da    PI: 7.2658
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99e-12136178146
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46 
                 s+y+GVr ++ +g+W  eI+ p++n  +++++lg+f+ +e+A  a+
  GAY53282.1 136 SKYRGVRPRP-WGKWTGEIKNPNKN--TAQVWLGTFDMPEDAGSAY 178
                 89*****999.********999665..5*************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSMGCKTPFL VLLREENYGD LVSFVRTCEL INLLLGWSGE KKRGVIFLSQ NRFNHHNLKL  60
HFSLQFKSLN TNSNIQQQIL DQSMAASAGN SSSTETVNSC LELISSSNPL DDLFDQSDYE  120
SEPTTPDTIR QKAVRSKYRG VRPRPWGKWT GEIKNPNKNT AQVWLGTFDM PEDAGSAYGP  180
APFQIHGQNA ELNFPQTRES HEEKHFRGAK GRFAAEIRDP KNGARLCLGT YDAPEGATLP  240
YDRASYKMRV ARAVLNFPHL LDSNTCEFLL RYQNDQMHII QVDFFHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.13e-21ERF family protein