PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53255.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 324aa    MW: 35193.1 Da    PI: 10.3107
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.6e-15210260255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+ + +g+++AeIrdp +  k +r +lg+f tae+Aa a+++a+ k++g
  GAY53255.1 210 HYRGVRQTP-SGKFAAEIRDPAK--KGARCWLGTFATAEQAALAYVRAAFKFRG 260
                 7********.7*********954..34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MKMKALGDKL SCASSPLSDG ELLMHILNGL GLGFLNLASF ITACRMEFED PYALLRTHES  60
RLEQQEQDVK IVFNANFAQG MFHANFAQTR GNYSRGNKGT THLKNHLDRC RAKIKFKGGG  120
GDQDKSTKST RYLASNPLVG IKENSLSVND LIKDTDNTEV VAKSNGTPVV TKGISAIDFI  180
VNFLLEAPTQ ANFPVADAAA LAVVPSKGNH YRGVRQTPSG KFAAEIRDPA KKGARCWLGT  240
FATAEQAALA YVRAAFKFRG RRALLNFPNF CAPEPVRIKS KRSLQEPSSS TDGAGRGPQR  300
GGEKCVSVAG SVGSQWRRLD ENVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-31ERF family protein