PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53078.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 605aa MW: 67520.6 Da PI: 4.9375

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.5e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp GfrF+Ptdeelv++yL+ k++g++ e+ +vi+e+d++k ePwdLp + +k++++ew+fF+++d+ky++g+r nrat++gyWkatgkd++++s ++ GAY53078.1 9 LPLGFRFRPTDEELVDFYLRMKINGHNDEV-SVISEIDVCKREPWDLPdlSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKS-GN 105 699**********************999.99**********9644889999***********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +l+g+kktLvf+ grapkg++t+Wvmheyr+ GAY53078.1 106 HLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA 136 ***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MAVLSLNSLP LGFRFRPTDE ELVDFYLRMK INGHNDEVSV ISEIDVCKRE PWDLPDLSVI 60 KTKDREWFFF CPQDRKYPNG HRLNRATAAG YWKATGKDRK IKSGNHLIGM KKTLVFHMGR 120 APKGKRTNWV MHEYRATADD LDGTKPGQSA FVLCRLFKKQ DESVEICVEV EPSESSPTSA 180 RSEFALDQTL LDCKPSVSHL AEKVTSNLQE CQTKSSEFTA TEIDQAMQEN FGDVFTTVML 240 EPLDCTLFPP LHSPSPVEKG SSSISHSVRN DLTTIDEKGQ LPSESDAYIT EFLDSILNTS 300 DENLFDESDC QWNSFFVSET PSNMTFVKDS GSCSESDAEV AQARQPNPDI TSSLCFKDNI 360 ARASPLKMLR MPEDFRTVTS QNSDNEPSIN FRNSCYLDDF CNADVESCEQ DVFSSVSTTG 420 QFHDAFGGFG DSNNHAVGVA SRNIVATGIR TRMRNPQSLP YREGFVNVKQ GDAPRRLRLQ 480 CKLQVGPVRL QSCMPEEDES KPIVAEGVAD AEKELPVNAA TGAMYELKGD SHLASSENSN 540 ISEEQTTDER TKGRLKSTVL MDKDTSNTFR AGHSNRSFAV LFRAAAVVVM FAILVSTWRC 600 LCLNF

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MAVLSLNSLP LGFRFRPTDE ELVDFYLRMK INGHNDEVSV ISEIDVCKRE PWDLPDLSVI  60
KTKDREWFFF CPQDRKYPNG HRLNRATAAG YWKATGKDRK IKSGNHLIGM KKTLVFHMGR  120
APKGKRTNWV MHEYRATADD LDGTKPGQSA FVLCRLFKKQ DESVEICVEV EPSESSPTSA  180
RSEFALDQTL LDCKPSVSHL AEKVTSNLQE CQTKSSEFTA TEIDQAMQEN FGDVFTTVML  240
EPLDCTLFPP LHSPSPVEKG SSSISHSVRN DLTTIDEKGQ LPSESDAYIT EFLDSILNTS  300
DENLFDESDC QWNSFFVSET PSNMTFVKDS GSCSESDAEV AQARQPNPDI TSSLCFKDNI  360
ARASPLKMLR MPEDFRTVTS QNSDNEPSIN FRNSCYLDDF CNADVESCEQ DVFSSVSTTG  420
QFHDAFGGFG DSNNHAVGVA SRNIVATGIR TRMRNPQSLP YREGFVNVKQ GDAPRRLRLQ  480
CKLQVGPVRL QSCMPEEDES KPIVAEGVAD AEKELPVNAA TGAMYELKGD SHLASSENSN  540
ISEEQTTDER TKGRLKSTVL MDKDTSNTFR AGHSNRSFAV LFRAAAVVVM FAILVSTWRC  600
LCLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	7e-94	NAC family protein