PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52925.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 328aa    MW: 37843.6 Da    PI: 9.1893
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.24.3e-46581891128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                 lppG+rF Pt+eelv++yL +k+eg++ el++vi+ +++y++ePw+Lpk    k+++++++w+fF++r++++++g r++r+t+sgyWkatg+   v+s+
  GAY52925.1  58 LPPGYRFFPTEEELVSFYLINKLEGNRQELHRVIPVIRLYEIEPWHLPKlcgeKCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPGYVYSS 156
                 79****************************99****************767777777888*************************************** PP

         NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +++++g+kkt+vfykg+ap+g+kt+W mheyr+
  GAY52925.1 157 DNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRA 189
                 *******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MPQKAKIFSF YSANFHSHFF SLDPIYITMN SNKQSTRRRD IRTKEKKKTL KYKRMEELPP  60
GYRFFPTEEE LVSFYLINKL EGNRQELHRV IPVIRLYEIE PWHLPKLCGE KCQGDTEQWF  120
FFTPRQEREE RGGRPSRTTA SGYWKATGSP GYVYSSDNRV IGVKKTMVFY KGKAPTGRKT  180
KWKMHEYRAI EGASNPSSAV IPKLRHEFSL CRIYVKSESF RAFDRRPLEA APREEQPHGG  240
GATTSAPNNI MVRGNESNTS FQDAIMCDGD VATTSAQNNI MGPRSSSPET SYSGEDHSDY  300
PETNLDNNCN IVADPQPPLW DWEQLNWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.24e-86NAC family protein