PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52857.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 208aa MW: 22797.6 Da PI: 6.232

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.4	1.3e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC++C ++ H GAY52857.1 4 LCDVCESAAAILFCAADEAALCRSCDEKVH 33 7**************************998 PP
2	zf-B_box	28.4	3.3e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C ++ H g H GAY52857.1 52 DVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGgkrtH 91 5799****************************96555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRSCDE KVHMCNKLAS RHVRVGLADP SDVPRCDICE 60 NAPAFFYCEI DGSSLCLQCD MTVHVGGKRT HGRYLLLRQR VEFPGDKAGR LEELALQSLD 120 QNKITRDQTQ PFRITARENQ QNHRGSPVPM LDGNADGDGK VDNKLIDLNA RPNRGQASNN 180 QGMDVLSGTN HDSAGVVPVG SFKREPEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-90	DBB family protein