PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52799.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 454aa    MW: 51574.7 Da    PI: 4.2697
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-07294342247
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ ++ ++v  ++       W+  +  ++  Rt ++++s+++++
       GAY52799.1 294 KNWTKEEENKFHEVVSSYPVSmgknFWDHLSLVFP-SRTKNELVSYYFNV 342
                      68***************98878888**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MLCAETRYYI ENLLSSIVGN YKGEMIHKRP FLDEDCFEFP CKHPKQWECT NYLAPMVHMS  60
PPADGHQKPQ TSDGDGEQNI NRCRDQGRFL FGPVAEVSNG TEKEFEIGSD CISPLFWANG  120
LFAEGDANSE EVYLSLFPEY FATEHQIRTF LQSDEIYSSH LDHPPVKSVS IGPEYQADVP  180
EWCLQGSKNS LAHLDGSDHQ VRLERLSGSC LVVDDVQGEK LLGTCVVSMP DSAPSANYYS  240
QSLVTRNDCE CLDKGSIRCV RQHVMEAREK LRVNLGHKIF EELGFHEMGE EVSKNWTKEE  300
ENKFHEVVSS YPVSMGKNFW DHLSLVFPSR TKNELVSYYF NVFILQKRAE QNRFDPLNID  360
SDDDEWQRCD LGAAEEDEES GVEFLSNRGV SAYQQDDHVE NCQDDTEGGY LIDDCKNDAN  420
VVHTVATDEE EDGDVDDVPE PHVRDLFSHS STDT