PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52752.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 384aa    MW: 41723.1 Da    PI: 4.4828
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-194594255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  GAY52752.1 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94
                789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MARKRKTCEG VEEKGADEGN MTWDEMVKEA AAAAALGGAR RARKRFVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSPSTYS TPALPSKITN  120
LLLQRLKARN NSAFSPSSSF PANNQSERQP AEEYCEPAAT SADLSDTRLA DFLNDTEDYN  180
AIISTNASTL DSMTTSLKSC LSDQKEEDSG SGSGLDYNLS DTGGQCSSGE EEAGSDIGSI  240
DFHFLDNVGS SSCFYSPFEI AAEIEDLVEA ETCADEPSML RAAMKRMKYE RKFSASLYAF  300
NGIPECLKLR LESGTKKACG KSELSKLQNA CSGKNIEEGK KIEEEGKQDE NSESSSAMGS  360
NSPTSDGELS IWSSLDLPPI CFVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-22ERF family protein