PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52662.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 506aa MW: 59218.9 Da PI: 6.8041

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.7	3.6e-29	96	181	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++++++++ kkplW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea GAY52662.1 96 RWPRQETLTLLEIRSRLDSKFKEANHKKPLWDEVSRIMaEEHGYHRSEKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 181 8***********************************999*************************98..55667*****85 PP
2	trihelix	49	1.6e-15	388	460	1	72
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 rW + e+l L+++ +++e+++++ g +++ Wee+++km++ g+ rs+++ kekwen++++y + ++ ++ GAY52662.1 388 RWNEPETLNLMQLITSLETKFEQsGYSNESIWEEIAAKMASFGYYRSAIEFKEKWENMQMYYHHHGHDQIAKQ 460 8******************974679*********************************98887777654 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MADQYGHQLP DLGRLATGRT HFPVNQETPQ PYFFNRSINN ETVMLAAGEM VLPAAGGLVR 60 FGHHHDFAAA ATNHPTAVVD MESSGWGNTN ESGNGRWPRQ ETLTLLEIRS RLDSKFKEAN 120 HKKPLWDEVS RIMAEEHGYH RSEKKCREKF ENLYKYYKKT KEGKAGRQDG KHYRFFRQLE 180 ALYGETSNNQ NSVSELSPLD QNTTNFLHQT PNQENQENQE ASNHLEQKLS DQSLSFSNTS 240 EFETASSGNN NDEDLSAIAF MMNQKSMEKH NKMNESRSGK RDKRSSNWKG KVKEFVDAQM 300 RELMESQEAW MERMLKTIED REKERLCKEE EWRKQEMARF DKVHEFWARE RAWVEGRDNA 360 LMEALKKVTG RREPEVVSSS SLIMHDCRWN EPETLNLMQL ITSLETKFEQ SGYSNESIWE 420 EIAAKMASFG YYRSAIEFKE KWENMQMYYH HHGHDQIAKQ KLERMELFLP SNNPYAGTQG 480 HQSCFHIQQI NEGQQQFWEK GKTKRN

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MADQYGHQLP DLGRLATGRT HFPVNQETPQ PYFFNRSINN ETVMLAAGEM VLPAAGGLVR  60
FGHHHDFAAA ATNHPTAVVD MESSGWGNTN ESGNGRWPRQ ETLTLLEIRS RLDSKFKEAN  120
HKKPLWDEVS RIMAEEHGYH RSEKKCREKF ENLYKYYKKT KEGKAGRQDG KHYRFFRQLE  180
ALYGETSNNQ NSVSELSPLD QNTTNFLHQT PNQENQENQE ASNHLEQKLS DQSLSFSNTS  240
EFETASSGNN NDEDLSAIAF MMNQKSMEKH NKMNESRSGK RDKRSSNWKG KVKEFVDAQM  300
RELMESQEAW MERMLKTIED REKERLCKEE EWRKQEMARF DKVHEFWARE RAWVEGRDNA  360
LMEALKKVTG RREPEVVSSS SLIMHDCRWN EPETLNLMQL ITSLETKFEQ SGYSNESIWE  420
EIAAKMASFG YYRSAIEFKE KWENMQMYYH HHGHDQIAKQ KLERMELFLP SNNPYAGTQG  480
HQSCFHIQQI NEGQQQFWEK GKTKRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-97	Trihelix family protein