PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY52567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 152aa MW: 17600.5 Da PI: 9.289 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2e-20 | 22 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdps +g +r +lg+f taeeAa+a+++a+ +++g+ GAY52567.1 22 RYRGVRRRP-WGKFAAEIRDPSRQG--ARLWLGTFETAEEAARAYDRAAFNMRGH 73 6********.**********96543..**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MEKPSKGKER QEKEEKRREE VRYRGVRRRP WGKFAAEIRD PSRQGARLWL GTFETAEEAA 60 RAYDRAAFNM RGHLAILNFP NEYYSQVMGY AGPHRLSSSS SSSSVSSERF EKGGSSSSGQ 120 SQRQVIELEY LDDKVLEEML ESEDEKKERK KD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-26 | ERF family protein |