PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY52566.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 25323.2 Da PI: 5.4614 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 5.8e-18 | 84 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +++g GAY52566.1 84 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 134 69*******.**********422...25*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDSLFFHSPN SISSSESSFG SPESFPFYNN YLPFNENDSE EMLLYGLIAE ATPEATSEAL 60 VSSKRIKEEE VSSTTEENPT KEKSYRGVRR RPWGKFAAEI RDSTRHGIRV WLGTFDSAEA 120 AALAYDQAAF SMRGSSAILN FPVERVQESL KDMKCNTEEG CSPVVALKRK HSMRRKMVTN 180 NKKHKERDNL RIENFVVLED LGADYLEELL SSSESNTTTT ARPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-65 | ERF family protein |