PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52533.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 297aa    MW: 33316.7 Da    PI: 8.8371
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.51.8e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lvd+++++G g+W+t ++  g++R++k+c++rw +yl
       GAY52533.1 14 KGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding55.51.3e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ eE+e +++++k lG++ W++Ia++++ gRt++++k++w+++
       GAY52533.1  67 RGKFSLEEEEAIIQLHKVLGNK-WSAIASRLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGRPPSSDKN GLKKGPWTAE EDQKLVDYIQ KHGHGRWRTL PKNAGLKRCG KSCRLRWTNY  60
LRPDIKRGKF SLEEEEAIIQ LHKVLGNKWS AIASRLPGRT DNEIKNYWNT HIKKKLLRMG  120
IDPVTHSPRL DLLELSSILS SSLCNSTQLN ASNLLSLGLL NPDLLNLATT LLSCQNTTPQ  180
FTPQNFQQQN HQALQYPINQ ACLKTPVDSN PPYVNETQTP QAILEQLSSN PTNFSWQYIL  240
TNFIANMRFG SVLATPSSSS TPLNSSSTNY VNGCTEDERD SYCSNLLFDS LDAIGLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-83MYB family protein