PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52395.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HSF
Protein Properties Length: 270aa    MW: 30152.7 Da    PI: 7.3859
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind118.15.3e-37101022103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+e+g +f+v+++ +f+k++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g++ell++i+
    GAY52395.1  10 FLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFSKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADK---------WEFANENFRRGHRELLTEIR 97 
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k++
    GAY52395.1  98 RRKTA 102
                   **975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MAQRSVPAPF LMKTYQLVDD PSTDDVISWN ESGATFIVWK TADFSKDLLP NYFKHNNFSS  60
FVRQLNTYGF RKIVADKWEF ANENFRRGHR ELLTEIRRRK TATGQSAQTA GKTKATSPSN  120
SGEDMGSTST SSPESKNQGS VETAKFADLS DENAKLRRDN ETLSSELAQA KKQCDELITF  180
LTEYVKVGPD QINRIMGQGS CGSILDGLVG DTDDDEKMES SGGDLKLFGV WLKGERKKRA  240
REETLVCGGS HEMKKVEFRA PYINSSKVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.18e-99HSF family protein