PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52378.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 267aa    MW: 29913.5 Da    PI: 10.0753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-08176216954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++++P       +K++ a++L +A++Y+k L
  GAY52378.1 176 ARHRRERISERIRILQRIVPGG-----TKMDTASMLDEAIHYVKFL 216
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDVDMIKASQ QAEDHMDMMA VIMQMEKLPE FCEAFNNNIS PLHHEIHFSN ANTNSNISTQ  60
PIYHNPINNV SSPPPTFTNP SSSLPLFINT TTPVQEPMTP PLHQPNNVVT GGRLKTSLPS  120
PSPYPPTLEK RNSMAAMREM IFRIAAMQPI HIDPESIKPP KRRNVKISKD PQSVAARHRR  180
ERISERIRIL QRIVPGGTKM DTASMLDEAI HYVKFLKKQV HTLEQAGAHR PMGGVGFQGA  240
PMAGVAYPSL VKASHQMVDN INMQMFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.11e-41bHLH family protein