PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52366.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 391aa    MW: 42161.8 Da    PI: 6.8285
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.75e-14164210555
                 HHHHHH.HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerEr.rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  E+ rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  GAY52366.1 164 HNLSEKqRRRSRINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKHLQ 210
                 88888725678***************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MEQDHVYQYN NNVNIYSTAS SSSVHNTHVP PSSSDEISMF LHQILYRSSS SSSTTVTATT  60
SSPNVTHVVP HPVEISAHRL SKSSGISAVD LVNTSVGVGG SLSGNVMVSG ANVSSSSVGL  120
SENENTDEHD CQSEEGIQAS VDEVTAKPVR PRSSSKRSRA AEVHNLSEKQ RRRSRINEKM  180
KALQSLIPNS NKTDKASMLD EAIEYLKHLQ LQVQVLTMRN GMSLHPMCLP GILPPIQLPH  240
MRMGFGVGNG SLHMNSTGTL VSQETSTLNV FNLPNQHISS NQLQLPSTSN VTNSETEFGL  300
DASIQANFGP FQHGTASGET SREDMLPHQH LNVGHSVTNP SAPAVHTFNS QGSDLKDRSS  360
LEACMIGRDR AEGVHLKAID HNLVLSPHLK G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-55bHLH family protein