PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY52134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 33585.2 Da PI: 7.8545 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 140.6 | 9.7e-44 | 7 | 125 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv++yL++k+ ++++ + +i+e+d+yk++PwdLp + +ekewyfF++rd+ky++g+r+nr g dk++ + + GAY52134.1 7 LPPGFRFHPTDEELVMHYLCRKCLSQPIAV-PIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRRR------GAGADKPIGQ--PKP 96 79**************************99.88***************65556799********************74......4789999987..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkgekt+W+mheyrl GAY52134.1 97 VGIKKALVFYAGKAPKGEKTNWIMHEYRL 125 9**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MTAELQLPPG FRFHPTDEEL VMHYLCRKCL SQPIAVPIIA EIDLYKFDPW DLPDLALYGE 60 KEWYFFTPRD RKYPNGSRPN RRRGAGADKP IGQPKPVGIK KALVFYAGKA PKGEKTNWIM 120 HEYRLADVDR SARKKNSLRL DDWVLCRIYN KKGSIEKKQQ VTNRRPNFTE TEAEEKKPVV 180 MPSGMDKSTS GGALIPNPAS TVTGTGTVND YMYFDTSDSV PKLNTDSSCS EHVVSPEFTC 240 EVQSEPKMQP WENTLGFPYN YLDSTMDISF NSQFQGNNQL SPLQDMFMYL PKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-135 | NAC family protein |