PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51988.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Nin-like
Protein Properties Length: 282aa    MW: 30929.7 Da    PI: 9.4502
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK76.23.7e-242673249
      RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                +k++s++d+skyFslp+ dAA++Lgvc++vLK+iCR +G++RWP+Rk 
  GAY51988.1 26 TKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
                799********************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MMSSLSLHNN SSISKAAASS SISTSTKSLS FDDISKYFSL PLSDAANHLG VCVSVLKKIC  60
RDNGLDRWPY RKFLSGKSIE DIKKYAAREK SKELAELSKI ARKSGFQPLN NETSKLHGVA  120
SPPNLQQQGS KSSPVGQPHV LLNANLTKGI MALDEFKHGF PSDGLSTASY KWWGSRSSDG  180
NDGIHKDESE IDEEDKQAEA KADKESATQA TGNEKSGNGE TESNVDPQGS GLLTAVRKRT  240
VEEGQEALKL GVYKKYCVKQ LDRKERVLLH RIFKSSLPKE WP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.18e-11Nin-like family protein