PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY51850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 724aa MW: 83061.1 Da PI: 8.9892 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.5 | 2.1e-12 | 34 | 120 | 6 | 98 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ++ l+ + l++p kf++++g + s +++ + gr W v+l +k+ ++ ++ GW eF + + +g f++Fk++g+s+f +v +f+ GAY51850.1 34 IVPSILQDKKLRIPDKFVQKFGDE--LSSIAKFTIPGGRMWFVEL--KKCNKQLWFDIGWHEFIEHCSIHSGYFLIFKYQGNSNF--NVYIFD 120 4455566677********999855..7779***************..9***9*****************************9999..998886 PP | |||||||
2 | B3 | 60.7 | 2.4e-19 | 254 | 347 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f +l ps+v ++ +l +p +fa+++ +g+k +t+ d++g++W v++i+++++ + ++kGW eFv +n+L+e D++vF+l+++++ +l+ ++fr GAY51850.1 254 FRVILRPSYVYRTLLLHVPTSFARKYlNGIKG---YITIIDSNGKQWPVRCIFKNGGAK--FSKGWPEFVWENNLDESDVCVFELIKSNDVTLKATIFR 347 667899********************866643...59999***********99888866..89***********************9999999999998 PP | |||||||
3 | B3 | 61 | 2.1e-19 | 398 | 488 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ffkv +ps v +++ l++p+kf++++g + s tl+ ++gr+W+v l rk +++++l++GW +F++ + + +g f+vFk+ ++s+f v vf+ GAY51850.1 398 FFKVILPSTVQEKK-LRIPRKFVKRFGDE--LSAVATLNVPNGRVWQVGL--RKDGRKIWLQDGWDNFAEYHSIAVGYFLVFKYAKNSTF--DVLVFD 488 99**********98.********999865..8999***************..********************************999998..777765 PP | |||||||
4 | B3 | 45.6 | 1.3e-14 | 637 | 716 | 12 | 96 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + + +++p kf ++h + +++ ++l+d++g++W +l++ ++++ +++GW F k ++Lk+g ++vF+l++ ++ l+v++ GAY51850.1 637 RYSYMYVPSKFSKKHLIR--GTRSIKLQDSDGKEWPAQLTW-SSGCG--IKGGWPAFSKYKNLKQGHVCVFELIKAKDILLKVSI 716 55679**********555..4457***************64.44444..9***********************998877677766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 724 aa Download sequence |
MSEQQTTVDE AMSRPLAPYL QEEGKRSCIF YKLIVPSILQ DKKLRIPDKF VQKFGDELSS 60 IAKFTIPGGR MWFVELKKCN KQLWFDIGWH EFIEHCSIHS GYFLIFKYQG NSNFNVYIFD 120 LAISEIEYPS LEEPSDSKQC HVPIEKDKEK NSSLRILPSL CASCPDPFSP ATKVLDEGVC 180 YKCNKDSTSG VKIEYLHIPK DEHNQETAFH CPQDKGIQFK NTSDEVGLWR AVTTEEKKRT 240 VHAAEMYKSN NPLFRVILRP SYVYRTLLLH VPTSFARKYL NGIKGYITII DSNGKQWPVR 300 CIFKNGGAKF SKGWPEFVWE NNLDESDVCV FELIKSNDVT LKATIFRVLE DARPVWKLKG 360 ASTIKQKFLI QKGLYTTVAN NNVKQMAGGN RRAETSHFFK VILPSTVQEK KLRIPRKFVK 420 RFGDELSAVA TLNVPNGRVW QVGLRKDGRK IWLQDGWDNF AEYHSIAVGY FLVFKYAKNS 480 TFDVLVFDMT ACEIDYPYDY EETESEEGDE METENSVEIL SFTKMNTPPV QQNQVKPGSK 540 PEKKKIGGIK LETATNSREK KRCPTHGNEH GKLKKAAYHE VETDSSDGDQ VFEEMGIFMS 600 EGHRYLSVEE RQSLVTAVRL FKPQNPSFVD ILRSKKRYSY MYVPSKFSKK HLIRGTRSIK 660 LQDSDGKEWP AQLTWSSGCG IKGGWPAFSK YKNLKQGHVC VFELIKAKDI LLKVSIHASS 720 DFLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 4e-80 | B3 family protein |