PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51829.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 247aa    MW: 26665.9 Da    PI: 7.6375
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002695117123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  GAY51829.1  95 FSCNYCRRKFYSSQALGGHQNAH 117
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MLPPNSNLEL ENDSEVSSHV ASNISAKEAS PGPSKDTNSS CLTNVIKLNP DPGPLSLDLT  60
LHFKSNDIDR SKGTGETSGE VAAAQTPAAT VPRVFSCNYC RRKFYSSQAL GGHQNAHKRE  120
RTMAKRAMRM GIFSDRYTSL ASLPLHGSAF RSLGIKAHAA MHQGVVPPQR PPDMRGGARF  180
EQGYFAMPMF MEDDDIDLFW PGSFRQVSEA VGGNPTLDFA QGSNGNFAAM PPPPRTDSSA  240
PDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.15e-49C2H2 family protein