PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51648.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 311aa    MW: 37103.3 Da    PI: 9.7103
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1842.3e-26131221190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY +Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++   ++++    + + tr gC a+l++ +++ +kw+vtk+ +eHnHel+
  GAY51648.1 131 EFYVAYGRRTGFTVRIHHNRRSRINNVVIGQDFVCSKEGFREKKYMYRKDR-VlpPPPITREGCPAMLRLALRDGDKWVVTKFIKEHNHELM 221
                 6******************************************99983333.244899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MTKQNIIEYF ALIYVQMVAI FRHFSTTAGY NKKRSFNRNI EEGCQWYYPV IKLVEPSGFL  60
EPTIKTAHKR DLPKVRPKNK EDVIEYISPP STSYHSWRLK FYNKRVYKTS ESDAEEPYIG  120
LEFKSRDDAR EFYVAYGRRT GFTVRIHHNR RSRINNVVIG QDFVCSKEGF REKKYMYRKD  180
RVLPPPPITR EGCPAMLRLA LRDGDKWVVT KFIKEHNHEL MSPSKVPWRG STKNFISEDE  240
KDRRIRELTI ELNNERQRFK RRCAAYQEQL NMVFKFVEEH TDHLSGRVKD IVDNIRELED  300
EQPENSDCKC V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.15e-36FAR1 family protein