PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51595.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 321aa MW: 36608 Da PI: 8.3135

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.6	6.1e-22	40	131	1	83
trihelix 1 rWtkqevlaLiearremeerlr.........rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 rWt+qe+ +Li+++r +e+r+r r+ + +p+W++v++++++ g++r p+qC+++w nl +++kik++e++ ++e++s +++ + GAY51595.1 40 RWTRQETIVLIQGKRVVEDRIRgfrtstsafRSDQSEPKWDSVASYCKQYGVNRRPVQCRKRWGNLLVDFRKIKRWESQMKEEKQSFWVMRN 131 8*****************99664443333346********************************************999998888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MAPGSNDKHE DGSSLPNGYN EEQAIGGNTD DRGKTARHPR WTRQETIVLI QGKRVVEDRI 60 RGFRTSTSAF RSDQSEPKWD SVASYCKQYG VNRRPVQCRK RWGNLLVDFR KIKRWESQMK 120 EEKQSFWVMR NESRKQMKLP GYFDREVYDV LDGVLAMPAV PLTTMSVSEE DEDDEVFDSD 180 RSTAAGDGLF SDSEPSQRQE IGHNPEKETT ERQSPIKKVA APLHVADTLK EKLAGTTTAN 240 GSTTQERWKR RRLSSCVSKE TNMGDLLIKV LERNSSMLNT QLEAQNINCQ LDREQKKEHS 300 DNLIAAMNKL TDALLRIGNK L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	253	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-87	Trihelix family protein