PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY51589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 27097.7 Da PI: 9.7169 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.8 | 1.7e-20 | 56 | 105 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a+++++g GAY51589.1 56 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALAYDEAALRFKG 105 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 244 aa Download sequence |
MSAMVSALSQ VIGNTQNSPT SLQLSQNPNF TTSSSNTSEQ DLSQRVKDQG NVRRRHYRGV 60 RQRPWGKWAA EIRDPKKAAR VWLGTFDTAE AAALAYDEAA LRFKGSKAKL NFPERVQANL 120 TTHRYQDHYY HAAAATTSQQ VSNPPPPPPP RPLPLTQEVM YSNLFQYQQA NYGIPSGFYG 180 EYRYLPVTLP TTSSSSSSSS ATSSQQPQQH ELLRYGMQLE SSSSSASDPH ESTRRNSDTS 240 HPGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61890.1 | 2e-27 | ERF family protein |